Introduction: The ultra-structural characteristics of neuron organelles are important indicators of the degree of brain damage during ischemic exposure, which necessitates the study of changes in the ultrastructure of brain neurons. Methods: Models of subtotal, stepwise subtotal, partial and total cerebral ischemia were carried out on 24 outbred white male rats. Electron microscopy methods were used. Results: The data obtained indicate that with total cerebral ischemia the disturbances are more pronounced than with partial cerebral ischemia and stepwise subtotal cerebral ischemia. Conclusion: The data obtained, due to their novelty and relevance; represent a fundamental basis for further studies of neurons in various parts of the brain during cerebral ischemia, with subsequent implementation of the results into clinical practice.