CD4 Binding Induces Conformational Changes in the Gp120 Glycoprotein - Abstract
Human immunodeficiency virus 1 (HIV-1) infection is a slowly replicating retrovirus that leads to acquired immunodeficiency syndrome (AIDS). In this paper,
the PDB file of gp120 and CD4 were obtained from the Protein Data Bank. The Expasy-ProtParam tool was used to analyze the physicochemical properties
of HIV-1 gp120. ClusPro 2.0 was used to dock the interaction between gp120 and CD4. We described structural basis, affinity and kinetics of binding, and
explored how CD4 cumulatively targeted most of the external surface of the envelope glycoprotein. These results showed that uncleaved gp120 had native-like
structures and supported their used as candidate antibodies.