Loading

Bayesian Monitoring of Safety Signals in Blinded Clinical Trial Data

Short Communication | Open Access

  • 1. Abbvie Inc. 1 North Waukegan Road, North Chicago, North Chicago, IL 60064
+ Show More - Show Less
Corresponding Authors
Shihua Wen, AbbVie, Abbvie Inc. 1 North Waukegan Road, North Chicago, North Chicago
Abstract

Monitoring of patient safety is an indispensable part of clinical trial planning and conduct. Proactive safety signal monitoring using blinded data in on-going clinical trials enables pharmaceutical sponsors to monitor patient safety closely while maintaining the study blind. Bayesian methods, by their nature of updating knowledge based on accumulating data and synthesis of prior knowledge, provide an excellent framework for carrying out such monitoring of safety. This short communication summarizes a straightforward Bayesian framework which can be applied to safety monitoring for one or more adverse events of special interest in real clinical trial settings. This framework is general enough to allow adaptation to a number of different Bayesian models appropriate for application to different clinical settings and types of data (such as rare events, exposure-dependent events or continuous laboratory parameters). An instructive case study is presented to demonstrate the utility of the proposed method.

Keywords


•    Safety signal monitoring
•    Interim analysis
•    Bayesian monitoring
•    Blinded clinical trial

ABBREVIATIONS

DMC: Data Monitoring Committee; AESI: Adverse Event of Special Interest

Cirtation

Wen S, Ball G, Dey J (2015) Bayesian Monitoring of Safety Signals in Blinded Clinical Trial Data. Ann Public Health Res 2(2): 1019.

INTRODUCTION

In randomized clinical trials, interim reviews of safety data are usually planned during the design stage and conducted periodically by a data monitoring committee (DMC). For these planned interim analyses, unblinded safety data are used to compare the safety profile of the experimental treatment to that of the control group. In order to minimize any operational bias on the part of the sponsor, the DMC would typically be independent and have minimal contact with the study team. Since safety signals may emerge at any time during a trial, it is also imperative for pharmaceutical sponsors to monitor patient safety in a real-time fashion during an on-going trial while maintaining the study blind, and engage the DMC as appropriate. However, formal statistical methods for such monitoring are not commonly available or in use. While clearly less informative than an unblinded review, blinded analysis of safety data, where the treatment group assignment is not revealed, can meaningfully augment and is logistically simpler than the DMC review process [1]. It can help identify potential safety issues ahead of scheduled DMC meetings and can help prevent such issues from becoming serious concerns. Moreover, for studies without a DMC, blinded safety monitoring could be used to assess the need for performing an unblinded safety analysis and/or establishing a DMC.

By virtue of incorporating prior knowledge about the safety profile of the control group and updating knowledge based on accumulating data, Bayesian methods provide an excellent framework for carrying out efficient and effective monitoring of blinded safety data. This short communication summarizes a simple Bayesian framework which can be applied to safety monitoring for one or more adverse events of special interest (AESI) in a real clinical trial setting. A simulation study is used to demonstrate the value for this method [2].

 

MATERIALS AND METHODS

The Bayesian framework proposed in this paper is based on evaluating the probability that a clinical parameter of interest exceeds a pre-specified critical value, given the observed blinded data. The critical value will typically be selected based on historical data about the control group or medical judgment. If this probability were to ever get big enough, it would signal a potential safety concern, leading to further investigation to confirm whether there is truly a safety problem related to the experimental treatment or not. Mathematically, this is formulated as checking the following inequality involving a Bayesian posterior probability (1):

Pr(θ > θc | blinded data) > P cut-off …... (1),

where θ is a particular clinical parameter or metric of interest (such as pooled proportion, risk difference or odds-ratio), θ c represents the critical value for comparison, and P cut-off is a probability threshold (such as 90% or 99%) representing the desired confidence needed to identify a potential safety signal.

In a blinded data setting, a common choice for θ is the pooled incidence rate (overall proportion) of an adverse event of special interest (AESI) among all subjects, since this is the rate that is directly estimable. In this case, a conjugate beta-binomial model would be a natural choice for Bayesian probability calculations. As noted above, other models within the general framework can be chosen depending on the inferential setting and data type, such as a gamma-Poisson model for incidence of rare events or to account for drug exposure at the time of analysis, or a conjugate normal-normal model when θ is continuous, such as the mean of a particular lab parameter.

A typical process for blinded safety monitoring of a particular AESI in a clinical trial setting can be described in the following steps.

1. The choice of the probability model, prior parameters and probability threshold should be pre-specified before the analysis begins. Usually several rounds of trial simulations are run to fine tune the decision parameters and fully understand the operating characteristics (OC) of the decision criterion prior to finalizing.

2. Assuming subjects are continuously enrolled into the study, after a certain number of subjects have been enrolled, start evaluating the posterior probability as described in inequality (1) based on the pre-defined decision criterion.

3. Apply the signal identification criterion at the desired predetermined frequency until the end of the trial or until the prespecified threshold is crossed. If the threshold is crossed, carry out additional investigations and/or consider an unblinded safety review, as appropriate.

We provide an illustrative example based on a real clinical trial setting to demonstrate the utility of the safety signal detection criterion and the blinded monitoring process. Consider a double blind, parallel group, randomized clinical trial of an experimental treatment versus placebo to prevent complications in patients undergoing major cardiovascular surgery. A total of 240 subjects were randomized to receive active drug or placebo in a 3:1 ratio. All randomized subjects were supposed to receive one dose of experimental study drug or placebo on day 1. The AESI under consideration was an early-onset event with a 4 week observation period and majority of events expected to occur within 10 days of dosing. The proposed safety monitoring process was to begin when 50 subjects overall had received study drug. Based on historical data, the background rate of the AESI was expected to be around 0.4% and therefore, the decision criterion was set as Pr (θ > 0.004 | the blinded data) > 0.99. Thus, a safety alert would be triggered if the posterior probability suggested that the overall incidence rate exceeding 0.4% was almost certain (exceeded 99%). A beta-binomial model was chosen as the primary probabilistic model and clinical trial simulations were conducted to understand the operating characteristics – essentially the power curve – of this decision criterion. Table 1 describes how parameter choices were matched with the clinical information for simulations to mimic the trial setting as closely as possible.

Since an incidence rate more than 2% was determined to be of serious clinical concern, sensitivity was mainly assessed under this assumption. To understand the robustness of findings, simulations were also performed for different prior settings and probability models as described in the next section. For each choice of model and decision criterion, a graphical monitoring chart can be created (as in Figure 1), showing the decision boundary in terms of the number of events observed by subjects treated which simplifies real-time application of the process. This chart is particularly helpful for study physicians.

RESULTS

Figure 1 shows the decision boundary for the primary model with a “flat” Uniform (0,1), i.e. Beta (1, 1), prior used to reflect the high uncertainty about the overall incidence rate on the trial. In particular, all incidence rates from 0% to 100% are equally likely under this prior, and there is a very high (98%) prior probability of the overall incidence rate exceeding 2%. With this prior, if 3 or more AESIs were to be observed out of 100 treated subjects, then an alert would be warranted (Figure 1).

Figure 2 shows the OC of the decision criterion in terms of statistical power (percentage of trials with at least one safety alert per the criterion) as a function of the fixed true overall incidence rate based on trial simulations under different choices of priors. Figure 2(a) shows that under the Beta (1, 1) prior, probability of seeing a signal would be high (>80%) when the true rate was 2% or more, and fairly low (<7%) when the true rate was 0.4% or less. Thus the procedure is seen to have at least 93% specificity and more than 80% sensitivity.

Figure 2(b) shows the OC with a slightly more informative prior, Beta (0.1, 5), which has a mean event rate of 0.02 and approximately 18% probability that the overall rate exceeds 0.02. As may be expected, the specificity under this prior would increase to close to 98% but the sensitivity would decrease to less than 70%. Figure 2(c) shows the OC when slight uncertainty about the background rate was incorporated into the model by setting θc to be distributed as Beta (1,249) with the mean at 0.004. The sensitivity would decrease further, but only slightly. Figure 2(d) shows the OC for the safety signal decision criterion using a gamma-Poisson model with a less informative prior distribution of Gamma (0.001, 0.001). The purpose of this less informative prior is just to let the data dominate the posterior distribution. When incidence rates are low, the Poisson distribution provides a good approximation to the binomial. The performance of the procedure under this model is seen to be very similar to that in Figure 2(b).

Table 1: Choice of simulation parameters to match the corresponding clinical trial information.

Clinical Information Simulation Setting for OC
Double-blind, parallel group RCT with treatment to placebo allocation ratio of 3:1 Binary incidence data (AE or not) simulated using a Bernoulli distribution 
with parameter p (representing the true pooled rate) which ranged from 
0.1% to 8% for generating OCs under different true rates.
Background rate was projected to be 0.4% or less, with cause concern if the pooled rate exceeded 2% Safety monitoring was to begin after 50
subjects were enrolled, and repeated every 2 weeks until end of trial
Enrollment ramp-up with a peak
accrual rate of 8 subjects per week
2 subj./wk 3 wks, then 5 subj./wk 2
wks, and 8 subj./wk after that
An early-onset AE occurring within 4 weeks after dosing, with 
majority of events within 10 days.
The time to onset of AE followed an exponential distribution with mean of 
1 week for subjects with the AESI (76% Probability of incidence within 10 
days).
 

 

DISCUSSION AND CONCLUSION

These results show that it is feasible to meaningfully implement a formal process of continuously monitoring blinded data to augment the current practice of periodic unblinded safety reviews, as by a DMC. The performance of such blinded signal monitoring depends heavily on reliability of prior knowledge about the background incidence rate of the outcome of interest in the study population. If prior information can be appropriately incorporated, potential safety issues can be detected quicker and with more certainty. This is especially valuable for blinded studies without a formal DMC, to determine if and when a DMC may be needed. The proposed Bayesian approach can be easily adapted to different data types and decision criterion, and can provide useful information in a straightforward way for monitoring one or a few well-defined adverse events of special interest. Also, instead of posterior probabilities, as illustrated in this short communication, one may consider predictive probabilities for decision making, such as, how likely it would be for two more AESI to occur when an additional 20 subjects were enrolled. Although the mathematical evaluation of these probabilities could be different, the safety signal monitoring process and the decision framework would be the same.

DISCLOSURES

AbbVie Inc. funded the study. AbbVie was responsible for the study design, research, analysis, data collection, interpretation of data, and writing, reviewing, and approving of the publication. Shihua Wen, Greg Ball, and Jyotirmoy Dey are employees of AbbVie, Inc.

Received : 22 Jan 2015
Accepted : 07 Jul 2015
Published : 09 Jul 2015
Journals
Annals of Otolaryngology and Rhinology
ISSN : 2379-948X
Launched : 2014
JSM Schizophrenia
Launched : 2016
Journal of Nausea
Launched : 2020
JSM Internal Medicine
Launched : 2016
JSM Hepatitis
Launched : 2016
JSM Oro Facial Surgeries
ISSN : 2578-3211
Launched : 2016
Journal of Human Nutrition and Food Science
ISSN : 2333-6706
Launched : 2013
JSM Regenerative Medicine and Bioengineering
ISSN : 2379-0490
Launched : 2013
JSM Spine
ISSN : 2578-3181
Launched : 2016
Archives of Palliative Care
ISSN : 2573-1165
Launched : 2016
JSM Nutritional Disorders
ISSN : 2578-3203
Launched : 2017
Annals of Neurodegenerative Disorders
ISSN : 2476-2032
Launched : 2016
Journal of Fever
ISSN : 2641-7782
Launched : 2017
JSM Bone Marrow Research
ISSN : 2578-3351
Launched : 2016
JSM Mathematics and Statistics
ISSN : 2578-3173
Launched : 2014
Journal of Autoimmunity and Research
ISSN : 2573-1173
Launched : 2014
JSM Arthritis
ISSN : 2475-9155
Launched : 2016
JSM Head and Neck Cancer-Cases and Reviews
ISSN : 2573-1610
Launched : 2016
JSM General Surgery Cases and Images
ISSN : 2573-1564
Launched : 2016
JSM Anatomy and Physiology
ISSN : 2573-1262
Launched : 2016
JSM Dental Surgery
ISSN : 2573-1548
Launched : 2016
Annals of Emergency Surgery
ISSN : 2573-1017
Launched : 2016
Annals of Mens Health and Wellness
ISSN : 2641-7707
Launched : 2017
Journal of Preventive Medicine and Health Care
ISSN : 2576-0084
Launched : 2018
Journal of Chronic Diseases and Management
ISSN : 2573-1300
Launched : 2016
Annals of Vaccines and Immunization
ISSN : 2378-9379
Launched : 2014
JSM Heart Surgery Cases and Images
ISSN : 2578-3157
Launched : 2016
Annals of Reproductive Medicine and Treatment
ISSN : 2573-1092
Launched : 2016
JSM Brain Science
ISSN : 2573-1289
Launched : 2016
JSM Biomarkers
ISSN : 2578-3815
Launched : 2014
JSM Biology
ISSN : 2475-9392
Launched : 2016
Archives of Stem Cell and Research
ISSN : 2578-3580
Launched : 2014
Annals of Clinical and Medical Microbiology
ISSN : 2578-3629
Launched : 2014
JSM Pediatric Surgery
ISSN : 2578-3149
Launched : 2017
Journal of Memory Disorder and Rehabilitation
ISSN : 2578-319X
Launched : 2016
JSM Tropical Medicine and Research
ISSN : 2578-3165
Launched : 2016
JSM Head and Face Medicine
ISSN : 2578-3793
Launched : 2016
JSM Cardiothoracic Surgery
ISSN : 2573-1297
Launched : 2016
JSM Bone and Joint Diseases
ISSN : 2578-3351
Launched : 2017
JSM Bioavailability and Bioequivalence
ISSN : 2641-7812
Launched : 2017
JSM Atherosclerosis
ISSN : 2573-1270
Launched : 2016
Journal of Genitourinary Disorders
ISSN : 2641-7790
Launched : 2017
Journal of Fractures and Sprains
ISSN : 2578-3831
Launched : 2016
Journal of Autism and Epilepsy
ISSN : 2641-7774
Launched : 2016
Annals of Marine Biology and Research
ISSN : 2573-105X
Launched : 2014
JSM Health Education & Primary Health Care
ISSN : 2578-3777
Launched : 2016
JSM Communication Disorders
ISSN : 2578-3807
Launched : 2016
Annals of Musculoskeletal Disorders
ISSN : 2578-3599
Launched : 2016
Annals of Virology and Research
ISSN : 2573-1122
Launched : 2014
JSM Renal Medicine
ISSN : 2573-1637
Launched : 2016
Journal of Muscle Health
ISSN : 2578-3823
Launched : 2016
JSM Genetics and Genomics
ISSN : 2334-1823
Launched : 2013
JSM Anxiety and Depression
ISSN : 2475-9139
Launched : 2016
Clinical Journal of Heart Diseases
ISSN : 2641-7766
Launched : 2016
Annals of Medicinal Chemistry and Research
ISSN : 2378-9336
Launched : 2014
JSM Pain and Management
ISSN : 2578-3378
Launched : 2016
JSM Women's Health
ISSN : 2578-3696
Launched : 2016
Clinical Research in HIV or AIDS
ISSN : 2374-0094
Launched : 2013
Journal of Endocrinology, Diabetes and Obesity
ISSN : 2333-6692
Launched : 2013
Journal of Substance Abuse and Alcoholism
ISSN : 2373-9363
Launched : 2013
JSM Neurosurgery and Spine
ISSN : 2373-9479
Launched : 2013
Journal of Liver and Clinical Research
ISSN : 2379-0830
Launched : 2014
Journal of Drug Design and Research
ISSN : 2379-089X
Launched : 2014
JSM Clinical Oncology and Research
ISSN : 2373-938X
Launched : 2013
JSM Bioinformatics, Genomics and Proteomics
ISSN : 2576-1102
Launched : 2014
JSM Chemistry
ISSN : 2334-1831
Launched : 2013
Journal of Trauma and Care
ISSN : 2573-1246
Launched : 2014
JSM Surgical Oncology and Research
ISSN : 2578-3688
Launched : 2016
Annals of Food Processing and Preservation
ISSN : 2573-1033
Launched : 2016
Journal of Radiology and Radiation Therapy
ISSN : 2333-7095
Launched : 2013
JSM Physical Medicine and Rehabilitation
ISSN : 2578-3572
Launched : 2016
Annals of Clinical Pathology
ISSN : 2373-9282
Launched : 2013
Annals of Cardiovascular Diseases
ISSN : 2641-7731
Launched : 2016
Journal of Behavior
ISSN : 2576-0076
Launched : 2016
Annals of Clinical and Experimental Metabolism
ISSN : 2572-2492
Launched : 2016
Clinical Research in Infectious Diseases
ISSN : 2379-0636
Launched : 2013
JSM Microbiology
ISSN : 2333-6455
Launched : 2013
Journal of Urology and Research
ISSN : 2379-951X
Launched : 2014
Journal of Family Medicine and Community Health
ISSN : 2379-0547
Launched : 2013
Annals of Pregnancy and Care
ISSN : 2578-336X
Launched : 2017
JSM Cell and Developmental Biology
ISSN : 2379-061X
Launched : 2013
Annals of Aquaculture and Research
ISSN : 2379-0881
Launched : 2014
Clinical Research in Pulmonology
ISSN : 2333-6625
Launched : 2013
Journal of Immunology and Clinical Research
ISSN : 2333-6714
Launched : 2013
Annals of Forensic Research and Analysis
ISSN : 2378-9476
Launched : 2014
JSM Biochemistry and Molecular Biology
ISSN : 2333-7109
Launched : 2013
Annals of Breast Cancer Research
ISSN : 2641-7685
Launched : 2016
Annals of Gerontology and Geriatric Research
ISSN : 2378-9409
Launched : 2014
Journal of Sleep Medicine and Disorders
ISSN : 2379-0822
Launched : 2014
JSM Burns and Trauma
ISSN : 2475-9406
Launched : 2016
Chemical Engineering and Process Techniques
ISSN : 2333-6633
Launched : 2013
Annals of Clinical Cytology and Pathology
ISSN : 2475-9430
Launched : 2014
JSM Allergy and Asthma
ISSN : 2573-1254
Launched : 2016
Journal of Neurological Disorders and Stroke
ISSN : 2334-2307
Launched : 2013
Annals of Sports Medicine and Research
ISSN : 2379-0571
Launched : 2014
JSM Sexual Medicine
ISSN : 2578-3718
Launched : 2016
Annals of Vascular Medicine and Research
ISSN : 2378-9344
Launched : 2014
JSM Biotechnology and Biomedical Engineering
ISSN : 2333-7117
Launched : 2013
Journal of Hematology and Transfusion
ISSN : 2333-6684
Launched : 2013
JSM Environmental Science and Ecology
ISSN : 2333-7141
Launched : 2013
Journal of Cardiology and Clinical Research
ISSN : 2333-6676
Launched : 2013
JSM Nanotechnology and Nanomedicine
ISSN : 2334-1815
Launched : 2013
Journal of Ear, Nose and Throat Disorders
ISSN : 2475-9473
Launched : 2016
JSM Ophthalmology
ISSN : 2333-6447
Launched : 2013
Journal of Pharmacology and Clinical Toxicology
ISSN : 2333-7079
Launched : 2013
Annals of Psychiatry and Mental Health
ISSN : 2374-0124
Launched : 2013
Medical Journal of Obstetrics and Gynecology
ISSN : 2333-6439
Launched : 2013
Annals of Pediatrics and Child Health
ISSN : 2373-9312
Launched : 2013
JSM Clinical Pharmaceutics
ISSN : 2379-9498
Launched : 2014
JSM Foot and Ankle
ISSN : 2475-9112
Launched : 2016
JSM Alzheimer's Disease and Related Dementia
ISSN : 2378-9565
Launched : 2014
Journal of Addiction Medicine and Therapy
ISSN : 2333-665X
Launched : 2013
Journal of Veterinary Medicine and Research
ISSN : 2378-931X
Launched : 2013
Annals of Public Health and Research
ISSN : 2378-9328
Launched : 2014
Annals of Orthopedics and Rheumatology
ISSN : 2373-9290
Launched : 2013
Journal of Clinical Nephrology and Research
ISSN : 2379-0652
Launched : 2014
Annals of Community Medicine and Practice
ISSN : 2475-9465
Launched : 2014
Annals of Biometrics and Biostatistics
ISSN : 2374-0116
Launched : 2013
JSM Clinical Case Reports
ISSN : 2373-9819
Launched : 2013
Journal of Cancer Biology and Research
ISSN : 2373-9436
Launched : 2013
Journal of Surgery and Transplantation Science
ISSN : 2379-0911
Launched : 2013
Journal of Dermatology and Clinical Research
ISSN : 2373-9371
Launched : 2013
JSM Gastroenterology and Hepatology
ISSN : 2373-9487
Launched : 2013
Annals of Nursing and Practice
ISSN : 2379-9501
Launched : 2014
JSM Dentistry
ISSN : 2333-7133
Launched : 2013
Author Information X